STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_00429SH3 domain-containing protein. (1195 aa)    
Predicted Functional Partners:
PV08_03329
RanBD1 domain-containing protein.
   
 0.992
PV08_00176
Uncharacterized protein.
   
 0.829
PV08_08260
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.823
PV08_06168
NUP214 domain-containing protein.
    
 0.821
PV08_01560
WD_REPEATS_REGION domain-containing protein.
    
 0.820
PV08_02580
Pre-mRNA-processing protein 45.
    
 0.820
PV08_10563
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.819
PV08_09697
WD_REPEATS_REGION domain-containing protein.
    
 0.818
PV08_01579
Pre-mRNA-splicing factor syf1.
    
 0.816
PV08_10140
Peptidyl-prolyl cis-trans isomerase.
   
 0.808
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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