Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
T06_14049Uncharacterized protein. (39 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.760
Tonsl
Tonsoku-like protein.
    
 0.701
MYO5A
Unconventional myosin-Va; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.574
Gak
Cyclin-G-associated kinase.
    
 0.544
DYH1B
Cytoplasmic dynein 2 heavy chain 1.
    
 0.524
T06_10845
Caltractin.
    
 0.518
unc-10
Rab-3-interacting molecule unc-10.
    
 0.515
T06_16567
MAM domain-containing protein.
   
 0.503
Plk1
Serine/threonine-protein kinase PLK.
   
 0.502
ift20
Intraflagellar transport protein 20-like protein.
   
 0.490
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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