STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T06_172Uncharacterized protein. (34 aa)    
Predicted Functional Partners:
dcr-1
Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily.
    
 0.605
dcr-1-2
Endoribonuclease dcr-1.
    
 0.605
IPO7
Importin-7.
    
 0.597
T06_9598
M_domain domain-containing protein.
    
 0.581
Tsnax
Translin-associated protein X.
    
 0.579
Tsn
Translin.
   
 0.544
DROSHA
Ribonuclease 3.
    
 0.527
F02A9.4
Uncharacterized protein.
    
 0.503
SKIV2L2
Superkiller viralicidic activity 2-like 2.
    
 0.483
mtr-4
Helicase SKI2W.
    
 0.479
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.