STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T06_7619Uncharacterized protein. (60 aa)    
Predicted Functional Partners:
Fip1l1
Pre-mRNA 3'-end-processing factor FIP1.
    
 0.926
CSTF1
Cleavage stimulation factor subunit 1.
    
 0.926
Sympk
Symplekin.
   
 0.914
CPSF3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.908
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.887
Cpsf1
Cleavage and polyadenylation specificity factor subunit 1.
    
 0.884
pcf-11
Pre-mRNA cleavage complex 2 protein Pcf11.
    
 0.853
Papolg
Poly(A) polymerase gamma.
    
 0.847
Cstf3
Cleavage stimulation factor subunit 3.
   
 0.845
CSTF3
Cleavage stimulation factor subunit 3; Belongs to the actin family.
   
 0.845
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.