Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T06_1896Uncharacterized protein. (80 aa)    
Predicted Functional Partners:
KIF23
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.910
BUB1
Mitotic checkpoint serine/threonine-protein kinase BUB1.
   
 
 0.893
KATNB1
Katanin p80 WD40 repeat-containing subunit B1.
    
 
 0.831
col-155-4
Condensin complex subunit 3.
   
  
 0.819
T06_11067
Uncharacterized protein.
   
  
 0.818
ndc80
Kinetochore protein NDC80-like protein.
   
  
 0.803
T06_13916
Calmodulin; Belongs to the calmodulin family.
    
 
 0.800
CMD1
Calmodulin.
    
 
 0.800
birc5.2
Baculoviral IAP repeat-containing protein 5.2.
   
  
 0.794
KIF4A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.771
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: low (28%) [HD]