Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRBA2KRAB-A domain-containing protein 2. (103 aa)    
Predicted Functional Partners:
SCAND3
SCAN domain-containing protein 3.
  
 
   0.533
FANCM
Fanconi anemia group M protein.
    
  0.527
SCAND3-12
SCAN domain-containing protein 3.
  
 
   0.522
KRBA2-14
KRAB-A domain-containing protein 2.
  
     0.520
SCAND3-9
SCAN domain-containing protein 3.
  
 
   0.516
KRBA2-24
KRAB-A domain-containing protein 2.
  
     0.486
KRBA2-2
KRAB-A domain-containing protein 2.
  
     0.468
T06_6286
Uncharacterized protein.
  
     0.427
KRBA2-16
KRAB-A domain-containing protein 2.
  
     0.409
KRBA2-26
KRAB-A domain-containing protein 2.
  
     0.406
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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