Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PRKAG15'-AMP-activated protein kinase subunit gamma-1. (620 aa)    
Predicted Functional Partners:
PRKAB2
5'-AMP-activated protein kinase subunit beta-2.
   
 0.999
Prkaa2
Non-specific serine/threonine protein kinase.
   
 0.998
Camkk1
Calcium/calmodulin-dependent protein kinase kinase 1.
   
 0.993
T06_8588
Uncharacterized protein.
   
 0.991
STK11
Serine/threonine-protein kinase STK11.
   
 0.968
melk
Non-specific serine/threonine protein kinase.
   
 0.959
T06_13991
AMPK1_CBM domain-containing protein.
   
 0.935
unc-51
Serine/threonine-protein kinase unc-51.
    
 0.929
ACAC
Acetyl-CoA carboxylase.
   
 0.917
Mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.916
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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