Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mrpl1539S ribosomal protein L15, mitochondrial. (295 aa)    
Predicted Functional Partners:
mRpL9
39S ribosomal protein L9, mitochondrial.
  
 0.991
MRPL12
39S ribosomal protein L12, mitochondrial.
  
 0.991
MRPL4
39S ribosomal protein L4, mitochondrial.
  
 0.991
Mrpl17
39S ribosomal protein L17, mitochondrial.
  
 0.990
rps30a
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.989
MRPL1
39S ribosomal protein L1, mitochondrial.
  
 0.982
mrpl-11
Putative 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
  
 0.982
mrpl-19
Putative 39S ribosomal protein L19, mitochondrial.
   
 0.981
Mrpl16
39S ribosomal protein L16, mitochondrial.
  
 0.980
timm21
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
  
 0.980
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: medium (50%) [HD]