Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSU1Ras suppressor protein 1. (261 aa)    
Predicted Functional Partners:
unc-97
LIM domain-containing protein unc-97.
   
 0.998
ILK
Integrin-linked protein kinase.
   
 
 0.984
PARVB
Beta-parvin.
   
 0.979
Tonsl
Tonsoku-like protein.
    
 0.825
unc-89-3
Muscle M-line assembly protein unc-89.
    
 0.812
nudcd1
NudC domain-containing protein 1.
    
   0.797
Ppp1r7
Protein phosphatase 1 regulatory subunit 7.
  
   
 0.764
alkbh6
Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 6.
      
 0.718
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.584
Snrpb2
U2 small nuclear ribonucleoprotein B.
    
 0.572
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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