STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBSCR27Williams-Beuren syndrome chromosomal region 27 protein. (229 aa)    
Predicted Functional Partners:
rps30a
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.978
Tsr1
Pre-rRNA-processing protein TSR1-like protein.
   
 0.953
Ltv1
Protein LTV1-like protein.
   
 0.936
RPS13
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
    
  0.913
RPS6
40S ribosomal protein S6.
    
 0.909
rps8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.908
Rps11
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.908
RPS3A
40S ribosomal protein S3a.
    
  0.908
RPS27
40S ribosomal protein S27.
    
 0.906
RpS15Aa
40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
   
  0.898
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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