Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Insm2Insulinoma-associated protein 2. (487 aa)    
Predicted Functional Partners:
TEAD1
Transcriptional enhancer factor TEF-1.
    
 
 0.975
NEUROG3
Neurogenin-3.
   
 0.896
YAP1
Yorkie-like protein.
    
 
 0.779
BTRC
F-box/WD repeat-containing protein 1A.
    
   0.748
cnd-1
Neurogenic differentiation factor 1.
   
 0.703
NFIC
Nuclear factor 1 C-type.
      
 0.557
acj6
POU domain protein.
   
  
 0.546
Farp1
FERM, RhoGEF and pleckstrin domain-containing protein 1.
    
   0.537
OLIG2
Oligodendrocyte transcription factor 2.
   
 0.523
ACADSB
Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial.
      
 0.516
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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