Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T06_12939Uncharacterized protein. (85 aa)    
Predicted Functional Partners:
Sas10
Something about silencing protein 10.
   
  0.933
UTP14A
U3 small nucleolar RNA-associated protein 14-like protein A.
   
 0.859
ESF1
ESF1-like protein.
   
 
 0.848
PDCD11
Vesicular integral-membrane protein VIP36.
  
 0.846
dbe
KRR1 small subunit processome component-like protein.
   
 0.831
Ddx52
Putative ATP-dependent RNA helicase DDX52.
   
 0.830
Ftsj3
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 0.828
nst-1
Guanine nucleotide-binding protein-like 3-like protein.
  
 0.826
NOP58
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
  
 0.823
T06_11086
Uncharacterized protein.
   
 0.821
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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