STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K02A2.6-15Integrase catalytic domain-containing protein. (398 aa)    
Predicted Functional Partners:
FANCM
Fanconi anemia group M protein.
    
 0.638
T06_3727
Uncharacterized protein.
 
     0.463
T06_15176
Retrovirus-related Pol polyprotein from transposon TNT 1-94.
 
     0.460
T06_5226
DUF1758 domain-containing protein.
 
     0.442
T06_8203
Uncharacterized protein.
 
     0.438
T06_5276
Uncharacterized protein.
 
     0.434
T06_6785
Uncharacterized protein.
  
     0.425
T06_4294
Uncharacterized protein.
 
     0.418
T06_9833
Uncharacterized protein.
 
     0.411
T06_16706
Uncharacterized protein.
 
     0.411
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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