Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pde-3Putative 3',5'-cyclic phosphodiesterase pde-3; Belongs to the cyclic nucleotide phosphodiesterase family. (555 aa)    
Predicted Functional Partners:
F25B5.3
5'-nucleotidase; Belongs to the pyrimidine 5'-nucleotidase family.
     
 0.921
pde-1
Phosphodiesterase.
  
  
0.894
Pde2a
Phosphodiesterase.
    
 0.894
Gyc32E
Guanylate cyclase.
     
 0.892
PDE6D
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
     
 0.889
C27A7.1
Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.1.
     
 0.886
AMPD2
AMP deaminase 2.
     
 0.886
Cant1
Soluble calcium-activated nucleotidase 1.
     
 0.886
T06_6113
Uncharacterized protein.
     
 0.885
adcy9
Adenylate cyclase type 9; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
     
 0.884
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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