Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
gly-5Polypeptide N-acetylgalactosaminyltransferase. (674 aa)    
Predicted Functional Partners:
C38H2.2
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.915
B3gnt7
Hexosyltransferase.
    
 0.711
oxt
Xylosyltransferase oxt.
     
 0.680
Drap1
Dr1-associated corepressor.
     
  0.639
THOC3
THO complex subunit 3.
     
  0.575
Thoc1
THO complex subunit 1.
     
  0.575
Rab6a
Ras-related protein Rab-6A.
     
  0.525
Dctn4
Dynactin subunit 4.
     
  0.502
Actr10
Actin-related protein 10; Belongs to the actin family.
     
  0.502
DCTN6
Dynactin subunit 6.
     
  0.502
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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