Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ulp-1Sentrin-specific protease. (478 aa)    
Predicted Functional Partners:
smo-1-2
Small ubiquitin-related modifier.
    
 0.960
smo-1
Small ubiquitin-related modifier.
    
 0.939
Rangap1
Ran GTPase-activating protein 1.
    
 
 0.853
dvl3
Segment polarity protein dishevelled-like protein DVL-3.
    
  0.834
TEX10
Testis-expressed sequence 10-like protein.
    
 0.820
KPNB1
Importin subunit beta-1.
   
 
 0.810
T06_364
Uncharacterized protein.
   
 
 0.775
T06_1737
Uncharacterized protein.
   
 
 0.775
pro-1
Pre-rRNA-processing protein pro-1.
    
 0.775
Pias3
E3 SUMO-protein ligase PIAS3.
   
 
 0.753
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.