Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
eral1GTPase Era, mitochondrial. (424 aa)    
Predicted Functional Partners:
Mrps7
28S ribosomal protein S7, mitochondrial.
    
 0.994
T06_14099
Protein MEF2BNB-like protein.
   
 0.991
DAP3
28S ribosomal protein S29, mitochondrial.
    
 0.989
MRPS10
28S ribosomal protein S10, mitochondrial.
  
 0.980
mrps-16
Putative 28S ribosomal protein S16, mitochondrial.
   
 0.980
MRPS2
28S ribosomal protein S2, mitochondrial.
  
 0.974
AIMP2
Putative 28S ribosomal protein S25, mitochondrial.
    
 0.973
MRPS23
28S ribosomal protein S23, mitochondrial.
    
 0.972
Mrps33
28S ribosomal protein S33, mitochondrial.
    
  0.970
Mrps28
28S ribosomal protein S28, mitochondrial.
    
  0.970
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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