Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EME1Crossover junction endonuclease EME1. (490 aa)    
Predicted Functional Partners:
pro-1
Pre-rRNA-processing protein pro-1.
    
 0.939
Tonsl
Tonsoku-like protein.
    
 0.927
POP4
Ribonuclease P protein subunit p29.
     
  0.910
RPP30
Ribonuclease P protein subunit p30.
     
  0.910
T06_14204
Protein CLP1-like protein.
     
  0.910
Tsn
Translin.
     
  0.910
DROSHA
Ribonuclease 3.
     
  0.910
TSEN54
tRNA-splicing endonuclease subunit Sen54.
     
  0.910
Tsnax
Translin-associated protein X.
     
  0.910
F02A9.4
Uncharacterized protein.
     
  0.910
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.