STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN3APaired amphipathic helix protein Sin3a. (1309 aa)    
Predicted Functional Partners:
T06_12348
Histone deacetylase complex subunit SAP30-like protein.
    
 0.866
gei-8
Gex-3-interacting protein 8.
    
 0.850
pfn-1
Chromatin modification-related protein YNG2.
    
 
 0.813
HDAC1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.787
HDAC1-2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.787
hdac3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.787
HDAC1-3
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.787
HDAC3
Histone deacetylase 3.
   
 0.787
Hdac1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.787
Su(H)
Suppressor of hairless protein.
   
 0.749
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.