Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Dctn4Dynactin subunit 4. (515 aa)    
Predicted Functional Partners:
Dctn5
Dynactin subunit 5.
    
 0.999
Actr10
Actin-related protein 10; Belongs to the actin family.
   
 0.998
DCTN6
Dynactin subunit 6.
    
 0.998
dctn2
Dynactin subunit 2.
   
 0.998
abs
Dynactin subunit 1.
    
 0.997
Actr1a
Alpha-centractin; Belongs to the actin family.
   
 0.995
EMC4
ER membrane protein complex subunit 4.
    
 0.984
emc2-b
ER membrane protein complex subunit 2-B.
    
 0.983
EMC1
ER membrane protein complex subunit 1.
    
 0.982
cpa
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.979
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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