Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
asic1Acid-sensing ion channel 1; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (613 aa)    
Predicted Functional Partners:
Nedd4
E3 ubiquitin-protein ligase NEDD4.
    
 0.948
Trpm7
Transient receptor potential cation channel trpm; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.770
CACNA1G
Voltage-dependent T-type calcium channel subunit alpha-1I.
    
 0.769
NALCN
Sodium leak channel non-selective protein.
     
 0.762
sto-2
Stomatin-2.
    
 0.757
mec-2
Mechanosensory protein 2.
    
 0.757
T06_15022
XRN2-binding (XTBD) domain-containing protein.
    
 0.757
GRIK3
Glutamate receptor ionotropic, kainate 3.
     
 0.749
T06_13283
Protein unc-80-like protein.
     
 0.744
CAC
Voltage-dependent calcium channel type A subunit alpha-1.
     
 0.672
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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