Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
HDA2Histone deacetylase 2. (296 aa)    
Predicted Functional Partners:
htz-1
Histone H2A.V; Belongs to the histone H2A family.
   
 0.911
H2B-VII-3
Histone H2B; Belongs to the histone H2B family.
    
 0.870
H2B-VII-4
Histone H2B; Belongs to the histone H2B family.
    
 0.870
macrod2
O-acetyl-ADP-ribose deacetylase MACROD2.
   
  0.866
SIRT1
NAD-dependent protein deacetylase sirtuin-1.
    
 0.839
gei-8
Gex-3-interacting protein 8.
    
 0.838
Kat2a
Histone acetyltransferase KAT2A.
    
 0.824
POL-24
Retrovirus-related Pol polyprotein from transposon.
    
 0.800
Sirt4
NAD-dependent protein deacetylase sirtuin-4.
    
 0.794
KDM6A
Lysine-specific demethylase 6A.
    
 0.787
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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