STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC4Trafficking protein particle complex subunit 4. (699 aa)    
Predicted Functional Partners:
sedl-1
Putative trafficking protein particle complex subunit 2.
    
 0.999
TRAPPC8
Trafficking protein particle complex subunit 8.
    
 0.999
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.999
Trappc1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
trappc11
Trafficking protein particle complex subunit 11.
    
 0.998
C56C10.7
Putative trafficking protein particle complex subunit 13-like protein.
     
 0.988
RAB1A
Ras-related protein Rab-1A.
    
 0.977
ANAPC7
Ras-related protein Rab-33.
    
 0.923
RAB43
Ras-related protein Rab-43.
    
 0.923
SEC24C
Protein transport protein Sec24C.
     
 0.759
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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