Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ago2-2Protein argonaute-2. (129 aa)    
Predicted Functional Partners:
dcr-1
Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily.
    
 0.627
dcr-1-2
Endoribonuclease dcr-1.
    
 0.627
T06_9598
M_domain domain-containing protein.
    
 0.618
RpII215
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.593
cgh-1
ATP-dependent RNA helicase cgh-1; Belongs to the DEAD box helicase family.
    
 0.582
IPO7
Importin-7.
    
 0.568
Ago1
Protein argonaute-1.
  
     0.512
Tsnax
Translin-associated protein X.
    
 0.512
SIDT1
SID1 transmembrane family member 1.
    
 0.510
DROSHA
Ribonuclease 3.
    
 0.504
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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