Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NALCNSodium leak channel non-selective protein. (1765 aa)    
Predicted Functional Partners:
unc-79
Uncoordinated protein 79.
   
 0.997
T06_13283
Protein unc-80-like protein.
   
 0.997
unc-10
Rab-3-interacting molecule unc-10.
   
 0.940
CACHD1
VWFA and cache domain-containing protein 1.
    
 0.914
WDR35
WD repeat-containing protein 35.
    
 0.881
ift122
Intraflagellar transport protein-like protein.
   
 0.880
tamo
Voltage-dependent L-type calcium channel subunit beta-2.
    
 0.856
CACNB2
Voltage-dependent L-type calcium channel subunit beta-2.
    
 0.856
IFT140
Intraflagellar transport protein-like protein.
    
 0.843
GRAMD1B
GRAM domain-containing protein 1B.
    
 0.830
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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