Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T06_8103Uncharacterized protein. (164 aa)    
Predicted Functional Partners:
Su(H)
Suppressor of hairless protein.
    
 0.890
FANCM
Fanconi anemia group M protein.
     
  0.867
ran-4
Putative nuclear transport factor 2.
    
  0.838
ASCL4
Achaete-scute-like protein 4.
    
 0.802
Tle3
Transducin-like enhancer protein 1.
    
 0.736
Tle2
Transducin-like enhancer protein 2.
    
 0.736
let-70
Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.681
cnd-1
Neurogenic differentiation factor 1.
    
 0.671
NEUROG3
Neurogenin-3.
    
 0.671
Faap24
Fanconi anemia-associated protein of 24 kDa.
     
  0.660
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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