Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Slc12a5Solute carrier family 12 member 6. (1332 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.671
Stk39
STE20/SPS1-related proline-alanine-rich protein kinase.
    
 
 0.622
Wnk1
Serine/threonine-protein kinase WNK1.
    
 
 0.520
Amy2
Alpha-amylase.
    
 0.495
Slc3a1
Neutral and basic amino acid transport protein rBAT.
    
 0.495
Mal-B1
Maltase 1.
    
 0.495
amy
Alpha-amylase.
    
 0.495
Alkbh2
Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 2.
    
 0.495
foxg1
Forkhead box protein G1.
      
 0.477
Sod2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 0.455
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.