Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T06_11553Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
Eif2b4
Translation initiation factor eIF-2B subunit delta; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.998
Eif2b1
Translation initiation factor eIF-2B subunit alpha; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.998
Eif2b2
Translation initiation factor eIF-2B subunit beta; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.998
Eif2s2
Eukaryotic translation initiation factor 2 subunit 2.
   
 0.994
Eif2s3y
Eukaryotic translation initiation factor 2 subunit 3.
   
 0.991
eIF5
Eukaryotic translation initiation factor 5.
   
 0.990
Eif2s1
Eukaryotic translation initiation factor 2 subunit 1.
   
 0.989
rap-1
Ras-related protein Rap-1.
    
 0.918
dgk-5
Diacylglycerol kinase.
     
 0.912
T06_3923
Protein C9orf72.
     
 0.911
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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