Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
spen-2Uncharacterized protein. (787 aa)    
Predicted Functional Partners:
THOC2
THO complex subunit 2.
   
 0.916
Su(H)
Suppressor of hairless protein.
    
 0.911
gei-8
Gex-3-interacting protein 8.
   
 
 0.763
larp
La-related protein.
    
 
 0.547
RPL4
60S ribosomal protein L4.
    
   0.533
Dhx15
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
    
 
 0.533
T06_10646
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
   0.531
alyref-b
THO complex subunit 4-B.
    
 
 0.502
cdk12
Cyclin-dependent kinase 12.
   
   0.457
Rhou
Rho-related GTP-binding protein RhoU.
    
  0.415
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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