Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Yeats4YEATS domain-containing protein 4. (223 aa)    
Predicted Functional Partners:
meaf6
Chromatin modification-related protein MEAF6.
   
 0.963
ANKLE2
DNA methyltransferase 1-associated protein 1.
   
 0.961
YL-1
Vacuolar protein sorting-associated protein 72-like protein.
    
 0.958
RUVBL1
DNA helicase; Belongs to the RuvB family.
    
 0.950
Epc1
Enhancer of polycomb-like protein 1.
    
 0.950
Nipped-A
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
    
 0.946
Znhit1
Zinc finger HIT domain-containing protein 1.
   
 0.945
ACTR6
Actin-related protein 6; Belongs to the actin family.
   
 0.942
CFDP1
Craniofacial development protein 1.
    
 0.933
BRD2
Bromodomain-containing protein 2.
    
 0.911
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.