STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fig4Polyphosphoinositide phosphatase. (1085 aa)    
Predicted Functional Partners:
Pikfyve
1-phosphatidylinositol 3-phosphate 5-kinase.
    
 0.997
VAC14
Protein VAC14-like protein.
    
 0.977
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
   
 
 0.886
MTMR2
Myotubularin-related protein 2.
     
 0.883
Mtmr6
Myotubularin-related protein 6.
   
 
 0.873
Inpp4a
Type I inositol 3,4-bisphosphate 4-phosphatase.
     
 0.802
Pik3ca
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; Belongs to the PI3/PI4-kinase family.
     
 0.747
wipi2
WD repeat domain phosphoinositide-interacting protein 2.
    
 
 0.636
cpna-2
Copine family protein 2.
     
 0.578
RNASEH2C
Ribonuclease H2 subunit C.
     
 0.578
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.