Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TMEM47Transmembrane protein 47. (210 aa)    
Predicted Functional Partners:
jac-1
Juxtamembrane domain-associated catenin.
     
 0.785
T06_6405
Uncharacterized protein.
      
 0.688
tp53
Cellular tumor antigen p53.
    
 0.616
Apaf1
Apoptotic protease-activating factor 1.
      
 0.611
T06_5953
MMS19_N domain-containing protein.
      
 0.551
abhd12
Monoacylglycerol lipase ABHD12.
      
 0.544
PMRT15
Protein arginine N-methyltransferase 1.5; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
      
 0.543
TJP1
Tight junction protein ZO-1.
      
 0.534
Fat3
Protocadherin Fat 3.
     
 0.526
Fat3-2
Protocadherin Fat 3.
     
 0.526
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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