Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ARHGAP10Rho GTPase-activating protein 10. (1131 aa)    
Predicted Functional Partners:
rho-1
Ras-like GTP-binding protein rhoA.
    
 0.740
Rhou
Rho-related GTP-binding protein RhoU.
    
 0.589
Rac1
Ras-related C3 botulinum toxin substrate 1.
    
 0.589
Rac1-2
Ras-related C3 botulinum toxin substrate 1.
    
 0.589
PBDC1
Caskin-2.
    
 
 0.581
RhoGAPp190
Rho GTPase-activating protein.
    
  0.573
Gfod1
Glucose-fructose oxidoreductase domain-containing protein 1.
      
 0.553
Abi2
Abl interactor 2.
    
 
 0.549
F52C9.5-5
Uncharacterized protein.
    
  0.507
Snip1
Smad nuclear-interacting protein 1.
      
 0.501
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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