STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T06_4902Body wall muscle protein HR-29; Belongs to the small heat shock protein (HSP20) family. (178 aa)    
Predicted Functional Partners:
Mapkapk3
MAP kinase-activated protein kinase 3.
    
 0.705
HSF1
Heat shock factor protein 1.
    
 0.663
Hspa13
Heat shock 70 kDa protein 13.
   
 0.638
T06_2965
Trehalose-phosphatase.
   
 0.638
HSPA8
Heat shock cognate 71 kDa protein; Belongs to the heat shock protein 70 family.
   
 0.638
hsp-3
Heat shock 70 kDa protein C.
    
 0.572
hsp-6
Stress-70 protein, mitochondrial; Belongs to the heat shock protein 70 family.
    
 0.570
HSPA4L
Heat shock 70 kDa protein 4L.
    
 0.570
1a
Replicase polyprotein 1a.
     
 0.540
PABPC1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
     
 0.540
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.