Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Fhdc1-2FH2 domain-containing protein 1. (1289 aa)    
Predicted Functional Partners:
rho-1
Ras-like GTP-binding protein rhoA.
    
 0.948
pfn-3
Profilin; Belongs to the profilin family.
    
 0.914
dvl3
Segment polarity protein dishevelled-like protein DVL-3.
    
 0.909
Diaph3
Protein diaphanous-like protein 2.
    
 0.803
T06_9566
Formin-like protein.
    
 0.798
FCHO2
FCH domain only protein 2.
    
 
 0.785
Ddc
Aromatic-L-amino-acid decarboxylase.
    
 0.780
mlc-4-2
Putative myosin regulatory light chain.
    
 0.773
Rhou
Rho-related GTP-binding protein RhoU.
    
 0.759
Rac1
Ras-related C3 botulinum toxin substrate 1.
    
 0.759
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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