Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IscuIron-sulfur cluster assembly enzyme ISCU, mitochondrial. (1921 aa)    
Predicted Functional Partners:
NFS1
Cysteine desulfurase, mitochondrial.
  
 0.999
Fxn
Frataxin, mitochondrial.
    
 0.997
MOCOS
Molybdenum cofactor sulfurase.
  
 0.994
Fdx1l
Adrenodoxin-like protein, mitochondrial.
  
 0.994
T06_298
Uncharacterized protein.
  
 0.989
hsp-6
Stress-70 protein, mitochondrial; Belongs to the heat shock protein 70 family.
  
 0.980
NFU1
NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial.
  
 0.975
T06_5647
Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.
     
 0.969
NARFL
Cytosolic Fe-S cluster assembly factor NARFL; Belongs to the NARF family.
   
 
 0.963
BOLA3
BolA-like protein 3; Belongs to the BolA/IbaG family.
   
 0.928
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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