Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mrpl1739S ribosomal protein L17, mitochondrial. (309 aa)    
Predicted Functional Partners:
MRPL12
39S ribosomal protein L12, mitochondrial.
  
 0.996
MRPL47
39S ribosomal protein L47, mitochondrial.
   
 0.995
MRPL21
39S ribosomal protein L21, mitochondrial.
  
 0.993
mRpL9
39S ribosomal protein L9, mitochondrial.
  
 0.993
mrpl-19
Putative 39S ribosomal protein L19, mitochondrial.
  
 0.993
rplT
50S ribosomal protein L20.
  
 0.992
timm21
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
  
 0.992
mrpl-11
Putative 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.991
mrpl15
39S ribosomal protein L15, mitochondrial.
  
 0.990
rpl-17
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.989
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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