STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T06_2899Uncharacterized protein. (134 aa)    
Predicted Functional Partners:
T06_14571
Uncharacterized protein.
  
     0.494
T06_16340
DDE_Tnp_1_7 domain-containing protein.
 
     0.462
T06_11566
DDE_Tnp_1_7 domain-containing protein.
 
     0.453
T06_12225
DDE_Tnp_1_7 domain-containing protein.
 
     0.437
T06_6401
DDE_Tnp_1_7 domain-containing protein.
 
     0.430
Ap2b1
AP complex subunit beta.
    
  0.424
T06_12508
DDE_Tnp_1_7 domain-containing protein.
  
     0.421
sphk-1
Sphingosine kinase 1.
     
 0.405
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.