Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T06_3007Uncharacterized protein. (178 aa)    
Predicted Functional Partners:
NAT10
N-acetyltransferase 10.
    
 
 0.663
T06_2407
Histone H3.2.
    
  0.572
HHT2
Histone H3.2.
    
  0.572
Cenpa
Histone H3-like centromeric protein A.
    
  0.572
T06_1582
Histone H3; Belongs to the histone H3 family.
    
  0.572
HHT3
Histone H3; Belongs to the histone H3 family.
    
  0.572
Ip6k1
Kinase; Belongs to the inositol phosphokinase (IPK) family.
     
 0.542
Ipmk
Kinase; Belongs to the inositol phosphokinase (IPK) family.
     
 0.542
Yaf2
YY1-associated factor 2.
    
   0.538
T06_14617
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
     
  0.490
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.