Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DNTTIP2Deoxynucleotidyltransferase terminal-interacting protein 2. (198 aa)    
Predicted Functional Partners:
Sas10
Something about silencing protein 10.
   
 
 0.990
C16C10.2
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.990
MPHOSPH10
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 
 0.990
Fcf1
rRNA-processing protein FCF1-like protein.
   
 
 0.985
dbe
KRR1 small subunit processome component-like protein.
   
 
 0.978
WDR3
WD repeat-containing protein 3.
   
 
 0.975
UTP14A
U3 small nucleolar RNA-associated protein 14-like protein A.
   
 
 0.974
Utp18
U3 small nucleolar RNA-associated protein 18-like protein.
   
 
 0.971
WDR43
WD repeat-containing protein 43.
   
 
 0.970
WDR36
WD repeat-containing protein 36.
   
 
 0.967
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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