Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PicotPutative inorganic phosphate cotransporter. (521 aa)    
Predicted Functional Partners:
SLC17A5-3
Sialin.
  
  
 
0.884
C02C2.4-2
Putative transporter.
     
  0.865
unc-10
Rab-3-interacting molecule unc-10.
    
 0.857
MED8
Coiled-coil domain-containing protein 47.
   
 
  0.592
ruvbl2
DNA helicase; Belongs to the RuvB family.
   
 
 0.588
Cct3
T-complex protein 1 subunit gamma.
     
  0.561
cct-2
T-complex protein 1 subunit beta.
     
  0.561
PRP40B
T-complex protein 1 subunit eta.
     
  0.561
cct-4
T-complex protein 1 subunit delta.
     
  0.561
RPAP3
RNA polymerase II-associated protein 3.
     
  0.561
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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