Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AP1S2AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (161 aa)    
Predicted Functional Partners:
Ap2b1
AP complex subunit beta.
    
 0.998
AP1M1
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 0.998
AP1G1
AP-1 complex subunit gamma.
    
 0.997
Clta
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
   
 0.991
Cltc
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.989
CLTCL1
Clathrin heavy chain 2.
    
 0.989
Ap3d1
AP-3 complex subunit delta-1.
    
 0.989
dpy-23
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.989
AP3M1
AP-3 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
     
 0.980
T06_10185
Clathrin_bdg domain-containing protein.
    
 0.974
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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