STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rrp9U3 small nucleolar RNA-interacting protein 2. (460 aa)    
Predicted Functional Partners:
UTP15
U3 small nucleolar RNA-associated protein 15-like protein.
  
 0.999
NOP58
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
   
 0.999
hoip
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
CIRH1A
Cirhin.
   
 0.999
fbl
rRNA 2'-O-methyltransferase fibrillarin.
   
 0.999
NOP56
Nucleolar protein 56.
   
 0.999
noc4l
Nucleolar complex protein 4-like protein.
   
 
 0.998
wdr75
WD repeat-containing protein 75.
   
 0.998
PWP2
Periodic tryptophan protein 2-like protein.
   
 
0.998
WDR36
WD repeat-containing protein 36.
   
 
 0.997
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.