STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Uckl1Uridine kinase; Belongs to the uridine kinase family. (657 aa)    
Predicted Functional Partners:
leo1
RNA polymerase-associated protein LEO1.
    
 0.982
pan
Protein pangolin, isoforms A/H/I/S.
    
 0.926
Apc
Adenomatous polyposis coli protein.
   
 0.919
UMPS1
Uridine 5'-monophosphate synthase.
  
 0.905
uck2b
Uridine-cytidine kinase 2-B.
  
0.904
C29F7.3
UMP-CMP kinase 1; Belongs to the adenylate kinase family.
    
 0.851
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.849
mig-23
Nucleoside-diphosphatase mig-23; Belongs to the GDA1/CD39 NTPase family.
   
 
 0.836
gsk3b
Glycogen synthase kinase-3 beta.
    
 0.823
GSK3B
Glycogen synthase kinase-3 beta.
    
 0.823
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.