Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR37WD repeat-containing protein 37. (558 aa)    
Predicted Functional Partners:
PACS2
Phosphofurin acidic cluster sorting protein 2.
    
 
 0.931
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.899
IFT140
Intraflagellar transport protein-like protein.
    
 0.778
Gak
Cyclin-G-associated kinase.
   
 0.735
Tonsl
Tonsoku-like protein.
    
 0.731
Wrap53
WD repeat-containing protein 48.
    
 0.729
Pes1
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.674
hsdl2
Hydroxysteroid dehydrogenase-like protein 2.
    
 0.660
TEX10
Testis-expressed sequence 10-like protein.
   
 0.646
Taf12
Transcription initiation factor TFIID subunit 12.
    
 0.635
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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