Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhl3Kelch-like protein 3. (624 aa)    
Predicted Functional Partners:
acr-16-2
Cullin-3; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
 0.987
PDCD6
Programmed cell death protein 6.
    
 0.985
Sec13
Protein SEC13-like protein; Belongs to the WD repeat SEC13 family.
    
 0.979
SEC23A
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.949
SEC24B
Protein transport protein Sec24B.
    
 0.934
ZK180.4
GTP-binding protein SAR1; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.930
SEC24C
Protein transport protein Sec24C.
     
 0.929
rbx1
RING-box protein 1.
    
 0.906
Cul1
Cullin-1; Belongs to the cullin family.
    
 0.881
dvl3
Segment polarity protein dishevelled-like protein DVL-3.
    
 0.869
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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