Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T06_9497Uncharacterized protein. (141 aa)    
Predicted Functional Partners:
T06_12851
Uncharacterized protein.
   
 0.998
NDUFB5
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial.
   
 0.998
T06_5561
Uncharacterized protein.
   
 0.998
NDUFA2
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2.
   
 0.998
NDUFA13
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13.
   
 0.998
T06_3016
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10.
   
 0.997
nduf-6
Putative NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial.
   
 0.996
Ndufa8
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.995
T06_7716
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7.
   
 0.994
NDUFA5
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5.
   
 0.994
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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