Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TJP1Tight junction protein ZO-1. (1559 aa)    
Predicted Functional Partners:
MARCH1-2
Afadin.
   
 0.996
CTNNA2
Catenin alpha-2.
   
 0.976
YAP1
Yorkie-like protein.
   
 0.946
INADL
InaD-like protein.
    
 0.941
T06_14742
Uncharacterized protein.
    
 0.937
T06_6658
Uncharacterized protein.
    
 0.937
Enah
Protein enabled-like protein.
    
 0.913
pxf-1
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
     
 0.901
HSPA4L
Heat shock 70 kDa protein 4L.
    
 0.895
T06_6799
Y-box factor-like protein.
    
 0.894
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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