Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
T06_16899FIT family protein. (460 aa)    
Predicted Functional Partners:
T06_367
Putative sulfite oxidase, mitochondrial.
     
  0.877
Hexa
Beta-hexosaminidase.
     
  0.843
Gale
UDP-glucose 4-epimerase; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
     
  0.841
Naga
Alpha-galactosidase.
     
  0.759
atl2
Atlastin-2.
      
 0.717
Gpm6b
Neuronal membrane glycoprotein M6-b.
    
   0.671
Gusb
Beta-glucuronidase.
     
  0.626
unc-89-3
Muscle M-line assembly protein unc-89.
     
  0.621
1a
Replicase polyprotein 1a.
     
  0.603
PABPC1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
     
  0.603
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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