Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYT7-2Synaptotagmin-7. (262 aa)    
Predicted Functional Partners:
unc-64
Syntaxin-1A-like protein; Belongs to the syntaxin family.
   
 0.979
Snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.977
unc-41
Putative stoned B-like protein.
   
 0.968
snb-1
Synaptobrevin-1.
    
 0.925
Syt11
Synaptotagmin-11.
   
 0.918
rab-3
Ras-related protein Rab-3.
   
 0.899
Syn
Synapsin.
   
 0.886
unc-11
Phosphatidylinositol-binding clathrin assembly protein unc-11.
   
 0.850
unc-13
Phorbol ester/diacylglycerol-binding protein unc-13.
   
 
 0.825
SH3GL1
Endophilin-A2.
    
 0.821
Your Current Organism:
Trichinella sp. T6
NCBI taxonomy Id: 92179
Other names: T. sp. T6, Trichinella T6
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